Biology  by Bradford
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D1.2 Protein synthesis: revision map

The subtopic in the middle and eleven tasks round it: label four diagrams, complete two tables, put a process in order and fill 64 gaps. Every standard level statement has a box; the five boxes for higher level only are dashed and badged HL, and drop off for an SL class. Type into the blanks and check them, or print it on A4, Letter or A3 with an answer key.

D1.2 practice questionsThe whole D1 map

D1.2

Protein synthesis

Molecules · Continuity and changeName

D1.2.5, D1.2.6, D1.2.10The ribosome at work

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Each amino acid is brought by a carrier molecule whose pairs with a codon. The ribosome joins each new amino acid to the chain with a bond, then moves on by bases, so the chain grows one amino acid at a time.

D1.2.8, D1.2.9Using a codon table

GUU GUC GUA GUGValGCU GCC GCA GCGAlaGAU GACAspGAA GAGGluGGU GGC GGA GGGGly

This is part of a table of mRNA codons, the ones that start with G. The mRNA GGU GCA GAU GUG codes for , , and . Four different codons code for alanine: the code is .

D1.2.11One base, one amino acid

In sickle cell disease, a in the gene for the β chain of haemoglobin changes the mRNA codon GAG to . The sixth amino acid becomes instead of glutamic acid. At low oxygen the altered molecules stick together and distort red blood cells, which can then block .

D1.2 examPart of a eukaryotic chromosome at the momentHL

Part of a eukaryotic chromosome at the moment12345
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D1.2.1, D1.2.2Transcription

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The enzyme separates the two DNA strands by breaking the between their bases. Each incoming base pairs with an exposed base on one strand, adenine in the DNA with in the RNA, and the enzyme links them into a chain to that strand.

D1.2Protein synthesis

D1.2.2, D1.2.7, D1.2.8Codons and anticodons

Amino acidDNA templatemRNA codontRNA anticodon
MethionineTAC
PhenylalanineUUU
GlycineCCG
HistidineGTA

Read in threes, four bases give codons, more than enough for 20 amino acids. Almost all organisms use the same codons: the genetic code is .

D1.2.12, D1.2.13, D1.2.14Non-coding DNAHL

SequenceWhat it does
PromoterWhere bind, so that RNA polymerase can attach and begin transcription
IntronsTranscribed, then before the mRNA leaves the nucleus
TelomeresRepeated sequences that the ends of chromosomes
Genes for tRNA and rRNATranscribed into RNA that is used without being

Transcription runs in the direction: each new nucleotide joins the growing end of the RNA.

D1.2.3, D1.2.4A stable template

A DNA strand can be transcribed again and again without any change to its base sequence. In cells that will never again, such as most nerve cells, that sequence must be for the whole life of the cell. Only some of a cell's genes are at any one time. Transcription is the stage of gene expression, so it is a key point at which genes are switched on and off.

D1.2.15, D1.2.16Processing the transcriptHL

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In cells the first RNA copy of a gene is modified before it is translated. The structures added at its two ends the mRNA. The bottom mRNA joins the coding sections in another combination, , so one gene can code for more than one .

D1.2.17Starting translationHL

Number the steps in order.

  1. The large subunit attaches, completing the ribosome.
  2. A second tRNA binds to the next codon and a peptide bond forms.
  3. The small subunit of the ribosome binds to the 5′ end of the mRNA.
  4. The initiator tRNA, carrying methionine, pairs with the start codon.
  5. It moves along the mRNA to the start codon, AUG.

As the chain grows, a tRNA bringing a new amino acid enters the site, the tRNA holding the chain sits in the site, and the empty tRNA leaves from the site.

D1.2.18, D1.2.19Making insulin workHL

Many polypeptides must be modified before they can work. Insulin is made as pre-proinsulin: cutting off the gives proinsulin, and cutting out a middle section, the , leaves two chains held together by . Cells also break down proteins all the time in and reuse their , keeping the proteome working.

Word bank 5′ cap5′ to 3′64AAAAAlaalternative splicingamino acidsanticodonAspAUGC-peptidecapillariesCAUCCGcomplementaryconserveddegeneratedisulfide bondsdivideEeukaryoticexonexpressedfirstGGCGlyGUAGUGhydrogen bondsintronlarge subunitmRNAPpeptidepoint mutationpoly-A tailpolypeptidepromoterproteasomesprotectremovedRNARNA nucleotideRNA polymerasesignal peptidesmall subunitstabilizetemplate strandthreetranscription factortranscription factorstranslatedtRNAUACuniversaluracilValvaline

Answer key

Every box on the sheet with its gaps filled in, as the subtopic reads in full.
  1. LabelTranscription

    1. RNA polymerase
    2. template strand
    3. mRNA
    4. RNA nucleotide

    The enzyme separates the two DNA strands by breaking the hydrogen bonds between their bases. Each incoming base pairs with an exposed base on one strand, adenine in the DNA with uracil in the RNA, and the enzyme links them into a chain complementary to that strand.

  2. GapsA stable template

    A DNA strand can be transcribed again and again without any change to its base sequence. In cells that will never divide again, such as most nerve cells, that sequence must be conserved for the whole life of the cell. Only some of a cell's genes are expressed at any one time. Transcription is the first stage of gene expression, so it is a key point at which genes are switched on and off.

  3. LabelThe ribosome at work

    1. large subunit
    2. small subunit
    3. mRNA
    4. tRNA
    5. polypeptide

    Each amino acid is brought by a carrier molecule whose anticodon pairs with a codon. The ribosome joins each new amino acid to the chain with a peptide bond, then moves on by three bases, so the chain grows one amino acid at a time.

  4. TableCodons and anticodons

    Amino acidDNA templatemRNA codontRNA anticodon
    MethionineTACAUGUAC
    PhenylalanineAAAUUUAAA
    GlycineCCGGGCCCG
    HistidineGTACAUGUA

    Read in threes, four bases give 64 codons, more than enough for 20 amino acids. Almost all organisms use the same codons: the genetic code is universal.

  5. GapsUsing a codon table

    This is part of a table of mRNA codons, the ones that start with G. The mRNA GGU GCA GAU GUG codes for Gly, Ala, Asp and Val. Four different codons code for alanine: the code is degenerate.

  6. GapsOne base, one amino acid

    In sickle cell disease, a point mutation in the gene for the β chain of haemoglobin changes the mRNA codon GAG to GUG. The sixth amino acid becomes valine instead of glutamic acid. At low oxygen the altered molecules stick together and distort red blood cells, which can then block capillaries.

  7. TableNon-coding DNA HL

    SequenceWhat it does
    PromoterWhere transcription factors bind, so that RNA polymerase can attach and begin transcription
    IntronsTranscribed, then removed before the mRNA leaves the nucleus
    TelomeresRepeated sequences that protect the ends of chromosomes
    Genes for tRNA and rRNATranscribed into RNA that is used without being translated

    Transcription runs in the 5′ to 3′ direction: each new nucleotide joins the growing end of the RNA.

  8. LabelProcessing the transcript HL

    1. intron
    2. exon
    3. 5′ cap
    4. poly-A tail

    In eukaryotic cells the first RNA copy of a gene is modified before it is translated. The structures added at its two ends stabilize the mRNA. The bottom mRNA joins the coding sections in another combination, alternative splicing, so one gene can code for more than one polypeptide.

  9. OrderStarting translation HL

    1. The small subunit of the ribosome binds to the 5′ end of the mRNA.
    2. It moves along the mRNA to the start codon, AUG.
    3. The initiator tRNA, carrying methionine, pairs with the start codon.
    4. The large subunit attaches, completing the ribosome.
    5. A second tRNA binds to the next codon and a peptide bond forms.

    As the chain grows, a tRNA bringing a new amino acid enters the A site, the tRNA holding the chain sits in the P site, and the empty tRNA leaves from the E site.

  10. GapsMaking insulin work HL

    Many polypeptides must be modified before they can work. Insulin is made as pre-proinsulin: cutting off the signal peptide gives proinsulin, and cutting out a middle section, the C-peptide, leaves two chains held together by disulfide bonds. Cells also break down proteins all the time in proteasomes and reuse their amino acids, keeping the proteome working.

  11. Exam diagramPart of a eukaryotic chromosome at the moment HL

    1. transcription factor
    2. promoter
    3. RNA polymerase
    4. template strand
    5. RNA